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Atomic Structure

Subatomic Particles

ParticleSymbolRelative MassRelative ChargeLocation
Protonpp1+1+1Nucleus
Neutronnn100Nucleus
Electronee^-1/18361/1836 (negligible)1-1Electron shells

The atomic number ZZ equals the number of protons. The mass number AA:

A=Z+NA = Z + N

where NN is the number of neutrons.


Atomic Models

Thomson's Plum Pudding Model (1904)

Atoms are spheres of positive charge with electrons embedded within, like plums in a pudding. This model was disproved by Rutherford's scattering experiment.

Rutherford's Nuclear Model (1911)

Alpha particles were fired at thin gold foil. Most passed through, but some were deflected at large angles, and a few bounced back. This showed that:

  • Most of the atom is empty space
  • The positive charge and most of the mass are concentrated in a tiny, dense nucleus
  • Electrons orbit the nucleus

Bohr Model (1913)

Electrons occupy fixed energy levels (shells) at specific distances from the nucleus. Electrons can jump between levels by absorbing or emitting photons of energy:

ΔE=hf=hcλ\Delta E = hf = \frac{hc}{\lambda}

where h=6.63×1034Jsh = 6.63 \times 10^{-34} \mathrm{ J\, s} is Planck's constant.

Quantum Mechanical Model

Electrons occupy orbitals (regions of high probability) described by quantum numbers. This model replaces the idea of fixed orbits with probability distributions.

Quantum NumberSymbolDescription
PrincipalnnEnergy level (n=1,2,3,n = 1, 2, 3, \ldots)
Angular momentum\ellSubshell shape (00 to n1n-1)
Magneticmm_\ellOrbital orientation (-\ell to ++\ell)
Spinmsm_sElectron spin (+1/2+1/2 or 1/2-1/2)

Isotopes

Definition

Isotopes are atoms of the same element (same ZZ) with different numbers of neutrons (different NN and hence different AA). They have identical chemical properties but different physical properties (different masses, different nuclear stability).

Relative Atomic Mass

The relative atomic mass is the weighted average of the isotopic masses:

Ar=(isotopemass×fractionalabundance)A_r = \sum (\mathrm{isotope mass} \times \mathrm{fractional abundance})

Worked Example 1

Boron has two isotopes: 10B\mathrm{^{10}B} (19.9% abundance) and 11B\mathrm{^{11}B} (80.1% abundance). Calculate the relative atomic mass.

Solution

Ar=10×0.199+11×0.801=1.99+8.811=10.80A_r = 10 \times 0.199 + 11 \times 0.801 = 1.99 + 8.811 = 10.80

Mass Spectrometry

A mass spectrometer separates ions by their mass-to-charge ratio (m/zm/z):

  1. Vaporisation: Sample is vaporised
  2. Ionisation: Atoms are ionised by electron bombardment
  3. Acceleration: Ions accelerated by electric field
  4. Deflection: Ions deflected by magnetic field (lighter ions deflected more)
  5. Detection: Ion abundance recorded

The mass spectrum shows peaks at each m/zm/z value with heights proportional to isotopic abundance.


Electron Configuration

Order of Filling (Aufbau Principle)

1s<2s<2p<3s<3p<4s<3d<4p<5s<4d<5p<6s1s \lt 2s \lt 2p \lt 3s \lt 3p \lt 4s \lt 3d \lt 4p \lt 5s \lt 4d \lt 5p \lt 6s

Pauli Exclusion Principle

Each orbital holds a maximum of 2 electrons with opposite spins.

Hund's Rule

When filling degenerate orbitals (e.g., the three 2p2p orbitals), electrons occupy separate orbitals with parallel spins before pairing.

Worked Example 2

Write the electron configurations of:

Solution
  • Potassium (Z=19Z = 19): 1s22s22p63s23p64s11s^2\, 2s^2\, 2p^6\, 3s^2\, 3p^6\, 4s^1
  • Iron (Z=26Z = 26): 1s22s22p63s23p64s23d61s^2\, 2s^2\, 2p^6\, 3s^2\, 3p^6\, 4s^2\, 3d^6 or [Ar]4s23d6[\mathrm{Ar}]\, 4s^2\, 3d^6
  • Copper (Z=29Z = 29): [Ar]4s13d10[\mathrm{Ar}]\, 4s^1\, 3d^{10} (exception: full dd subshell is more stable)

Exceptions to Remember

  • Chromium (Z=24Z = 24): [Ar]4s13d5[\mathrm{Ar}]\, 4s^1\, 3d^5 (half-filled dd subshell)
  • Copper (Z=29Z = 29): [Ar]4s13d10[\mathrm{Ar}]\, 4s^1\, 3d^{10} (fully-filled dd subshell)

When forming cations, 4s4s electrons are lost before 3d3d electrons, because once the 3d3d subshell is occupied, it is at a lower energy than 4s4s.


PropertyTrendReason
Atomic radiusDecreasesIncreasing nuclear charge pulls electrons closer
First ionisation energyGenerally increasesElectrons held more tightly by greater nuclear charge
ElectronegativityIncreasesGreater attraction for bonding electrons
Metallic characterDecreasesAtoms are less willing to lose electrons
PropertyTrendReason
Atomic radiusIncreasesAdditional electron shells
First ionisation energyDecreasesOuter electrons further from nucleus, more shielding
ElectronegativityDecreasesLess attraction for bonding electrons
Metallic characterIncreasesEasier to lose outer electrons

Ionisation Energy

First ionisation energy is the energy required to remove one mole of electrons from one mole of gaseous atoms:

X(g)X+(g)+e\mathrm{X}(g) \to \mathrm{X}^+(g) + e^-

Dips in ionisation energy across a period:

DipElementReason
Group 2 to 13e.g. Mg to Alpp electron is easier to remove than ss electron (higher energy subshell)
Group 15 to 16e.g. P to SPaired pp electron has electron-electron repulsion

Worked Example 3

Explain why the first ionisation energy of sulfur is lower than that of phosphorus.

Solution

Phosphorus (Z=15Z = 15): [Ne]3s23p3[\mathrm{Ne}]\, 3s^2\, 3p^3. All three 3p3p electrons are unpaired.

Sulfur (Z=16Z = 16): [Ne]3s23p4[\mathrm{Ne}]\, 3s^2\, 3p^4. One of the 3p3p orbitals now contains a paired electron.

The fourth 3p3p electron in sulfur experiences electron-electron repulsion from its paired partner, making it easier to remove than the unpaired 3p3p electron in phosphorus.


Ionisation Energy and Group Identification

Successive ionisation energies reveal the group of an element. A large jump occurs when an electron is removed from a new, inner shell (closer to the nucleus, less shielded).

Worked Example 4

The first five ionisation energies of an element are: 578, 1817, 2745, 11577, and 14842 kJ/mol. Identify the element and its group.

Solution

The large jump between the 3rd and 4th ionisation energies indicates that the first three electrons are valence electrons and the fourth is from an inner shell. The element has three valence electrons, placing it in Group 13. With a first ionisation energy of 578 kJ/mol, this is aluminium.


Electronegativity

Electronegativity is the ability of an atom to attract the bonding pair of electrons in a covalent bond.

  • Fluorine is the most electronegative element (Pauling scale: 4.0)
  • Electronegativity increases across a period and decreases down a group
  • The difference in electronegativity between bonded atoms determines bond character:
    • ΔEN<0.5\Delta\mathrm{EN} \lt 0.5: non-polar covalent
    • 0.5ΔEN<1.70.5 \leqslant \Delta\mathrm{EN} \lt 1.7: polar covalent
    • ΔEN1.7\Delta\mathrm{EN} \geqslant 1.7: ionic

Common Pitfalls

  • Writing 4s23d64s^2\, 3d^6 instead of 3d64s23d^6\, 4s^2 when filling orbitals. The 4s4s subshell fills before 3d3d, so write it first. However, when writing cation configurations, remove 4s4s electrons first.
  • Confusing atomic number with mass number. Atomic number ZZ counts protons; mass number AA counts protons plus neutrons.
  • Forgetting that the first ionisation energy of an element is the energy to remove the outermost electron, not any electron.
  • Assuming electronegativity differences cleanly divide bonds into ionic and covalent. The boundary at ΔEN=1.7\Delta\mathrm{EN} = 1.7 is approximate.

Summary Table

TopicKey Point
Atomic number ZZNumber of protons
Mass number AAZ+NZ + N
IsotopesSame ZZ, different NN
Aufbau principleFill orbitals in order of increasing energy
Pauli exclusionMax 2 electrons per orbital
Hund's ruleFill degenerate orbitals singly first
Ionisation energy trendIncreases across period, decreases down group
Electronegativity trendIncreases across period, decreases down group

Problem Set

Problem 1: The first four ionisation energies of an element are 738, 1451, 7733, and 10540 kJ/mol. To which group does this element belong?

If you get this wrong, revise: Ionisation Energy and Group Identification

Solution

The large jump between the 2nd and 3rd ionisation energies indicates that the first two electrons are valence electrons. The element has two valence electrons, placing it in Group 2.

Problem 2: Write the electron configuration of Fe2+\mathrm{Fe}^{2+} and Fe3+\mathrm{Fe}^{3+}. Which ion is relatively more stable and why?

If you get this wrong, revise: Electron Configuration

Solution

Fe (Z=26Z = 26): [Ar]4s23d6[\mathrm{Ar}]\, 4s^2\, 3d^6

Fe2+\mathrm{Fe}^{2+}: remove two 4s4s electrons: [Ar]3d6[\mathrm{Ar}]\, 3d^6

Fe3+\mathrm{Fe}^{3+}: remove two 4s4s and one 3d3d: [Ar]3d5[\mathrm{Ar}]\, 3d^5

Fe3+\mathrm{Fe}^{3+} is relatively stable due to its half-filled 3d53d^5 configuration.

Problem 3: Neon has three naturally occurring isotopes: 20Ne\mathrm{^{20}Ne} (90.48%), 21Ne\mathrm{^{21}Ne} (0.27%), and 22Ne\mathrm{^{22}Ne} (9.25%). Calculate the relative atomic mass of neon.

If you get this wrong, revise: Isotopes and Relative Atomic Mass

Solution

Ar=20×0.9048+21×0.0027+22×0.0925=18.096+0.0567+2.035=20.188A_r = 20 \times 0.9048 + 21 \times 0.0027 + 22 \times 0.0925 = 18.096 + 0.0567 + 2.035 = 20.188

Problem 4: Explain why the first ionisation energy of sodium is much lower than that of neon.

If you get this wrong, revise: Ionisation Energy and Electron Configuration

Solution

Sodium (Z=11Z = 11) has electron configuration [Ne]3s1[\mathrm{Ne}]\, 3s^1. The single 3s3s electron is in a new shell further from the nucleus and is well shielded by the inner 10 electrons. It is relatively easy to remove.

Neon (Z=10Z = 10) has a stable noble gas configuration 1s22s22p61s^2\, 2s^2\, 2p^6 with a full outer shell. Removing an electron requires breaking this stable arrangement, which requires much more energy.

Problem 5: The electron transition from n=3n = 3 to n=2n = 2 in a hydrogen atom emits a photon. Calculate the wavelength of this photon. (En=2.18×1018/n2JE_n = -2.18 \times 10^{-18}/n^2 \mathrm{ J})

If you get this wrong, revise: Bohr Model

Solution

ΔE=E3E2=2.18×101892.18×10184=2.42×1019+5.45×1019=3.03×1019J\Delta E = E_3 - E_2 = \frac{-2.18 \times 10^{-18}}{9} - \frac{-2.18 \times 10^{-18}}{4} = -2.42 \times 10^{-19} + 5.45 \times 10^{-19} = 3.03 \times 10^{-19} \mathrm{ J}

λ=hcΔE=(6.63×1034)(3.0×108)3.03×1019=1.989×10253.03×1019=6.56×107m=656nm\lambda = \frac{hc}{\Delta E} = \frac{(6.63 \times 10^{-34})(3.0 \times 10^8)}{3.03 \times 10^{-19}} = \frac{1.989 \times 10^{-25}}{3.03 \times 10^{-19}} = 6.56 \times 10^{-7} \mathrm{ m} = 656 \mathrm{ nm}

This is in the red region of the visible spectrum (the H-alpha line).

Problem 6: Write the electron configuration of Cu2+\mathrm{Cu}^{2+} and explain why the 4s4s electrons are removed before the 3d3d electrons.

If you get this wrong, revise: Electron Configuration and Exceptions

Solution

Cu\mathrm{Cu} (Z=29Z = 29): [Ar]4s13d10[\mathrm{Ar}]\, 4s^1\, 3d^{10}

When forming Cu2+\mathrm{Cu}^{2+}, both the 4s4s electron and one 3d3d electron are removed:

Cu2+\mathrm{Cu}^{2+}: [Ar]3d9[\mathrm{Ar}]\, 3d^9

Once the 3d3d subshell is occupied, it is at a lower energy than the 4s4s subshell. Therefore, 4s4s electrons are removed first when forming cations, even though the 4s4s subshell fills before 3d3d.

Problem 7: An element has the following first seven ionisation energies (kJ/mol): 789, 1577, 3232, 4356, 16091, 19784, and 23793. Identify the group of this element.

If you get this wrong, revise: Ionisation Energy and Group Identification

Solution

Looking at the jumps: 789 to 1577 (small), 1577 to 3232 (moderate), 3232 to 4356 (moderate), 4356 to 16091 (very large).

The large jump between the 4th and 5th ionisation energies means the first four electrons are valence electrons. The element has four valence electrons, placing it in Group 14.

Problem 8: Explain why argon has a higher first ionisation energy than chlorine, even though chlorine has a greater nuclear charge.

If you get this wrong, revise: Ionisation Energy Dips Across a Period

Solution

Chlorine (Z=17Z = 17): [Ne]3s23p5[\mathrm{Ne}]\, 3s^2\, 3p^5. The last electron enters a 3p3p orbital that already contains one electron, so it experiences electron-electron repulsion, making it relatively easy to remove.

Argon (Z=18Z = 18): [Ne]3s23p6[\mathrm{Ne}]\, 3s^2\, 3p^6. All 3p3p orbitals are fully occupied. The additional proton in argon's nucleus (compared to chlorine) increases the effective nuclear charge significantly. Although there is some repulsion from paired electrons, the increased nuclear charge dominates, making argon's outer electrons harder to remove.

Problem 9: Calculate the relative atomic mass of silicon given its three isotopes: 28Si\mathrm{^{28}Si} (92.2%), 29Si\mathrm{^{29}Si} (4.7%), and 30Si\mathrm{^{30}Si} (3.1%).

If you get this wrong, revise: Isotopes and Relative Atomic Mass

Solution

Ar=28×0.922+29×0.047+30×0.031=25.816+1.363+0.930=28.11A_r = 28 \times 0.922 + 29 \times 0.047 + 30 \times 0.031 = 25.816 + 1.363 + 0.930 = 28.11

Problem 10: Define electronegativity and explain the trend in electronegativity across Period 3 from sodium to chlorine.

If you get this wrong, revise: Electronegativity and Periodic Trends

Solution

Electronegativity is the ability of an atom to attract the bonding pair of electrons in a covalent bond.

Across Period 3 from Na to Cl, electronegativity increases. This is because the nuclear charge increases by one proton each element while the shielding remains roughly the same (same number of inner shells). The increased effective nuclear charge pulls bonding electrons more strongly, increasing the atom's ability to attract shared electrons.

Sodium (EN =0.9= 0.9, lowest) to chlorine (EN =3.0= 3.0, highest in Period 3). Argon, being a noble gas, does not typically form covalent bonds and is not assigned an electronegativity value.